Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015931016.1_cds_XP_016477949.1_69627
CDS Infomation

[gene=LOC107799360] [db_xref=GeneID:107799360] [protein=CSC1-like protein RXW8] [protein_id=XP_016477949.1] [location=join(45280..45563,46050..46196,46577..46640,46767..46976,47603..47782,49678..49976,50260..50545,51317..51595,52843..53076,53151..53334,53418..53819,53991..54244)] [gbkey=CDS]
Sequence

ATGAAGCTATCTGCTCTTTTGACTTCTGCTGGAATCAATATTGCAGTCTGTGTGGTGCTG
TTCTTTTTGTATTCCTTATTGAGGAAACAACCAACTTTTGTAAATGTCTACTTCAGCCAG
AGATTTGCTCCTCATGTACGAACAAGACACCTTGGTACCTTTTGCTTTAACCGATTTGTT
CCTTCTCCTAGTTGGATCTTGAAGGCATGGGAAGCATCTGATGAAGAGATAGTTGCTGCC
GGGGGCTTGGATGCACTAGTGTTGGTGCGAATGATTGTTTTCAGTTTCCGAATATTCTCC
ATGGCAGCTATTCTGGGCCTTTTCCTGGTGCTGCCTCTTAATTATTTTGGTCAAGATATT
CGACGTCAGCAAATTCCAGCTGAGTCATTGGAGGTATTCACTATTGTGAATGTTGAGGCA
GGGTCAAGATGGTTCTGGGTGCACTGCCTTGCACTGTATATTATATCCTGCTCTGCTTGT
CTTCTTCTTTACTTTGAGTACAAAAGTATCTCAAGGAAGCGGCTGGCGTACTTCACTTCA
TCAGTTCGCCATCCAAGTTACTTCACAGTTCTGGTCCGTGCTATCCCAAAGTCTCAGAAA
GAATCATACAGTTATACAGTGGAAAAATTCTTCACAAATTACTACGCATCAAGTTATTTA
TCTCATCAAATTGTTTATCGTTCTGGCCCTGTTCAGAAACTGCTGACTGATGCAGAGGAG
GTGTTCAAGATGCTTAAAACAGCCCCAGAAGAGCTTTGTCCTGGATCAAATTTTATGAGA
TGTGGCCTTTGTGGAGGAACAAATCACTCTTTCAAGATGCTTCCTGCTGAGCGTGTTAGT
GATAAAGGAAGAGATGATTCTGATGGTTCAGATTTGAGAAAAAAGGAGTCTGCAGCTGCT
TTAGTTTTTTTCAGGAATCGGTATGCTGCTTTAGTTGCTTCTCAAGGTCTTCAATCTCAG
AATCCCATGTCATGGGTTACGGATCTTGCTCCAGAACCAGAGGATATGTACTGGTCAAAC
ATCTGTGTTCCTTACAGACTCCTTTGGATTCGTAGAGTTGCTCTCCTAGTGGCCTCTATA
CTTTTTGTGGCATTTTTCCTTGTGCCGGTTTCATTAACACAAAGTCTTGTTCATCTCGAC
AAGCTGCAAAAAACATTTCCATTTCCTATAGGAATTTTAAAGAGGACAGGAGTGACTCAG
CTAGTCACTGGATATCTACCAAGTGTTGTATTAATTTTATTTTCCTACATTGTTCCTCCA
TTGATGTTGCTATTTTCTAAAATGGAGGGTTCTATCTCTCGTAGTGGCAGGAAGAGGAGT
GCGTGCATAAAAGTTATTTACTTCTTCTTCTGGAATGTTTTCTTTGGTAACATCGTCTCC
GGTTCTGTTATTGAGAGATTAAACAAAATCTTTAAGGATGTAAACAATCTACTTTCAANT
TTAATGATAATAGCTTCTTTTAGCTTTTCTGCCACCTTTTTTATGACTTATGTTTTGACA
TCAGGCTGGGCAAGTCTCTCTGTTGAACTCATACAACCATTTGGTATCATCTGCAGATTG
TTCTCCAGGTTTATTCTCAGAAACAGGGAACAATCATCTCATGGAACACTGACTTTTCCA
TACCATACAGAAGTTCCGAGGATCCTCCTATTTGGGCTTTTTGGCTTTGCATATGCCATA
TTGGCACCTTTAATACTCCCATTCTTGGTGGTTTATTTTTCCATTGCTTACTTTGTATAC
CGTAATCAGATCCTCAATGTATATGTGACAAAATATCAAACTGGTGGAACCTATTGGCCT
ATTGTGCACAACACCACAATTTTCTCAATGGTGCTGATGCAAATTATAGCTTCGGCAGTC
TTTGGATTTAAAAAATCTTCAACGGCATCAAGCTTCACTATTCCATTGATAATCTGTACA
CTCCTCTTCAATGAGTACTGCAGGCAAAGGTTTGAACCATTATTCAAGTACACTCCTGCT
CAGATCCTCATTGAGATGGATAGGCGGGACGAGGAATGTGGGAGGATAAAAGAGATGTAT
CAACAACTCACATCAGCTTATTGTCAGTTCAAATCAACTTCACCTACATTGGGTGAAGCT
GTTCCTGAAAGTGATGAAGAGAACATGAGTGTCCATAAGGTTCAAGACGTAGAAGACATT
AATCCAGGGAGAAGTCCTCATCTTCCTCCATCATGTACATCTTTTGATAGTAAAAGTCCT
CCTCGTCTTCCTTTAACATCTTTGGATGTTAGAAGTCCTCATCTTCTTTCACCAAGTGCG
TCTTTGGAAATTAGAAGTCCTCATCTTCCGTCATCACGTACGTCTTTGGAAATTAGAAGT
CCTCATCTTCCGTCATCACGTACGTCTTTGGAAATTAGAAGTCCTCATCTTCCTTCATCA
CGTACGTCTTTGGAAATTAAGAGTCCTCCTCGTCTTCCTTCCTCACATACATCTTTGGAA
ATTAAAAGCCCTCGTCTTCCTTCATCACATACGTCTTTGGAAATTAAAAGCCCTCGTCTT
CTTTCACCACAAGCGTCTTTGGAAAATAAAAGTCCTCATATTCCTTCACCACGTACGTCT
TTGGAAAATAGAAGTCCTCATCTTCCTTCATCACGTACGTCTTTCGAAAATATAAATCCT
CCTCATCTTCCTTCACCACGTACTTCTTTGGAAATTAGAAGTCCTCGTCTTCTTTCACCA
TGTGCGTCTTTGGAAATTAAAAGTCCCCGTCTTCCTTCACCACATGCGTCTTTGGAAATT
AAAAGTCCTGTTCTTTCTTCATCATGTACGTCGTTGGAAGCTGAAGAATCATGTGCCAAG
TAG

Peptide Sequence

PEP ID

XP_016477949.1
PEP Infomation

PREDICTED: CSC1-like protein RXW8 [Nicotiana tabacum]
Sequence

MKLSALLTSAGINIAVCVVLFFLYSLLRKQPTFVNVYFSQRFAPHVRTRHLGTFCFNRFV
PSPSWILKAWEASDEEIVAAGGLDALVLVRMIVFSFRIFSMAAILGLFLVLPLNYFGQDI
RRQQIPAESLEVFTIVNVEAGSRWFWVHCLALYIISCSACLLLYFEYKSISRKRLAYFTS
SVRHPSYFTVLVRAIPKSQKESYSYTVEKFFTNYYASSYLSHQIVYRSGPVQKLLTDAEE
VFKMLKTAPEELCPGSNFMRCGLCGGTNHSFKMLPAERVSDKGRDDSDGSDLRKKESAAA
LVFFRNRYAALVASQGLQSQNPMSWVTDLAPEPEDMYWSNICVPYRLLWIRRVALLVASI
LFVAFFLVPVSLTQSLVHLDKLQKTFPFPIGILKRTGVTQLVTGYLPSVVLILFSYIVPP
LMLLFSKMEGSISRSGRKRSACIKVIYFFFWNVFFGNIVSGSVIERLNKIFKDVNNLLSX
LMIIASFSFSATFFMTYVLTSGWASLSVELIQPFGIICRLFSRFILRNREQSSHGTLTFP
YHTEVPRILLFGLFGFAYAILAPLILPFLVVYFSIAYFVYRNQILNVYVTKYQTGGTYWP
IVHNTTIFSMVLMQIIASAVFGFKKSSTASSFTIPLIICTLLFNEYCRQRFEPLFKYTPA
QILIEMDRRDEECGRIKEMYQQLTSAYCQFKSTSPTLGEAVPESDEENMSVHKVQDVEDI
NPGRSPHLPPSCTSFDSKSPPRLPLTSLDVRSPHLLSPSASLEIRSPHLPSSRTSLEIRS
PHLPSSRTSLEIRSPHLPSSRTSLEIKSPPRLPSSHTSLEIKSPRLPSSHTSLEIKSPRL
LSPQASLENKSPHIPSPRTSLENRSPHLPSSRTSFENINPPHLPSPRTSLEIRSPRLLSP
CASLEIKSPRLPSPHASLEIKSPVLSSSCTSLEAEESCAK

Transcript Sequence

Gene sequence data has not been registered.